Users can upload ped, map, and phe files for the analysis. Birthyear, Estimated Breeding Values (EBV), and sex information for each individual may be defined in a sample information txt file. Please --download the example datasets-- and check the tutorial for detailed information about the file formats. The PED, MAP, phenotype, and sample information files should be named with the suffix of “.ped”, “.map”, ”.phe”, and “.txt”, respectively. Please note, users can upload a file with a maximum size of 50MB. Datasets larger than that should be uploaded via FTP or analyzed locally with the standalone package.
Please upload the .phe file:
or select an uploaded file
or use an example dataset
When EBVs are available in sample information, users can skip uploading phe file
High levels of linkage disequilibrium (LD) and low quality SNPs affect both performance and efficiency of GM. High LD and low quality SNPs were pruned by default. Please note, analysis of large dataset could be very slow when turning off this setting.
LD pruning and quality control
Be notifled by email (Tick this box if you want to be notified by email when the results are available)
if available,the title will be included in the subject of the notification email and can be used as a way to identify your analysis.
Due to security concerns, the FTP functionality is temporarily disabled. If the file size is larger than 50MB, please use the standalone package