Users can upload ped and map files for the analysis. Please --download
the example datasets-- and check the tutorial for detailed
information about the
file formats. The PED and MAP files should be named with the suffix
of “.ped” and “.map”,
respectively. Please note, users can upload a file with a maximum
size of 50MB. Datasets larger than that should be uploaded
via FTP or analyzed locally with
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when the results are available)
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You may bookmark the following web address and view your results
note that the results will be stored for 7 days
Your job is currently running ... Please be patientAnalysis successful !The analysis is failed. Please verify the formats of your input files. In case that you are using the example datasets from FigShare (Version 1) , please note that the error is caused by a wrong sample_information file. We have updated this file in the lastest version of the examples (https://figshare.com/articles/dataset/AMBP_case_study/19390652).
Related pairs are summarized in the following table (Avg.
HetHet: the average Proportion of SNPs with double
heterozygotes; Avg. IBS0: the average proportion of genotypes
without identical alleles; Avg. PropIBD: the average proportion
of genomes shared identical-by-descent; Avg. Kinship: the
average kinship coefficient).
Distribution of the pairwise kinship coefficient and IBS0
(IBS0: proportion of genotypes without identical alleles,
e.g., AA and CC).
Download all the results
Due to security concerns, the FTP functionality
is temporarily disabled. If the file size is larger than 50MB,
please use the standalone package